Statistical Computing Laboratory

Publications

2022

Refereed Journal Articles

S. van der Tuin, SE. Balafas, AJ. Oldehinkel, EC. Wit, SH. Booij, H. Wigman

Dynamic symptom networks across different at-risk stages for psychosis: An individual and transdiagnostic perspective

Schizophrenia Research, Volume 239, January 2022, Pages 95-102, doi.org/10.1016/j.schres.2021.11.018

R. Juozaitienė, EC. Wit

Non-parametric estimation of reciprocity and triadic effects in relational event networks

Social Networks, Volume 68, January 2022, Pages 296-305, doi.org/10.1016/j.socnet.2021.08.004

2021

Refereed Journal Articles

L. Augugliaro, V. Vinciotti, EC. Wit

Extending graphical models for applications: on covariates, missingness and normality

Statistical Methods & Applications, 1-11, October 2021, doi.org/10.1007/s10260-021-00605-2

F. Abegaz, ACMF. Martines, MA. Vieira-Lara, M. Rios-Morales, EC. Wit, B. Bakker

Bistability in fatty-acid oxidation resulting from substrate inhibition

PLoS Computational Biology, 17(8), August 2021, e1009259, doi.org/10.1371/journal.pcbi.1009259

A. Calabria, G. Spinozzi, F. Benedicenti, D. Cesana, L. Del Core, S. Scala, EC. Wit, E. Montini

Hematopoietic Reconstitution and Lineage Commitment in HSC Gene Therapy Patients Are Influenced by the Disease Background

Molecular Therapy, Volume 29, Number 4, 2021, Pages 42-42

SN. Wood, EC. Wit

Was R < 1 before the English lockdowns? On modelling mechanistic detail, causality and inference about Covid-19.

PLoS ONE 16(9): e0257455, September 2021 doi.org/10.1371/journal.pone.0257455

SN. Wood, EC. Wit, M. Fasiolo, PJ. Green

COVID-19 and the difficulty of inferring epidemiological parameters from clinical data

The Lancet Infectious Diseases, Volume 21, Issue 1, Pages 27–28, doi.org/10.1016/S1473-3099(20)30437-0

2020

Refereed Journal Articles

R. Užupytė, E. C. Wit

Test for triadic closure and triadic protection in temporal relational event data

Social Network Analysis and Mining, 1-21(10), 2020 scopus.com

V. Vinciotti, E. C. Wit

Statistica Neerlandica special issue on Statistical Network Science

Statistica Neerlandica, 74(3), 220-221, 2020. doi.org/10.1111/stan.12212

F. Richter, B. Haegeman, R. S. Etienne, E. C. Wit

Introducing a general class of species diversification models for phylogenetic trees

Statistica Neerlandica, 74(3), 261-274, 2020 doi.org/10.1111/stan.12205

S. Ranciati., E.C. Wit, C. Viroli

Bayesian smooth-and-match inference for ordinary differential equations models linear in the parameters

Statistica Neerlandica, 74(3), 125-144, 2020 scopus.com

E. C. Wit, L. Augugliaro, H. Pazira, J. González, F. Abegaz

Sparse relative risk regression models

Biostatistics, 21(2), e131–e147, 2020 scopus.com

W. Kruijer, P. Behrouzi, D. Bustos-Korts, M. X. Rodríguez-Álvarez, S. M. Mahmoudi, B. Yandell, E. C. Wit, F. A. van Eeuwijk

Reconstruction of Networks with Direct and Indirect Genetic Effects

Genetics, 214(4), 781-807, 2020 doi.org/10.1534/GENETICS.119.302949

M. Signorelli, E. C. Wit

Model-based clustering for populations of networks

Statistical Modelling, 20(1), 9-29, 2020 doi.org/10.1177/1471082X19871128

S. de Vos, S. Patten, E. C. Wit, E. H. Bos, K. J. Wardenaar, P. de Jonge

Subtyping psychological distress in the population: A semi-parametric network approach

Epidemiology and psychiatric sciences, 29, 1-8, 2020 doi.org/10.1017/S204579601900026X

S. N. Wood, E. C. Wit, M.Fasiolo, P. J. Green

COVID-19 and the difficulty of inferring epidemiological parameters from clinical data

Lancet Infectious Diseases, 2020 doi.org/10.1016/S1473-3099(20)30437-0

I. Artico, I. Smolyarenko, V. Vinciotti, E. C. Wit

How rare are power-law networks really?

Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences, 476(2241), 2020 doi.org/10.1098/rspa.2019.0742

2019

Refereed Journal Articles

D. Pellin, L. Biasco, A. Aiuti, M.C. Di Serio, E.C. Wit

Penalized inference of the hematopoietic cell differentiation network via high-dimensional clonal tracking

Applied Network Science, 1-115, 2019 doi.org/10.1007/s41109-019-0225-1

K. Kamphorst, B.C. Oosterloo, A.M. Vlieger, N.B. Rutten, C.M. Bunkers, E.C. Wit, R.M Van Elburg

Antibiotic Treatment in the First Week of Life Impacts the Growth Trajectory in the First Year of Life in Term Infants

Journal of Pediatric Gastroenterology and Nutrition, 131-136, 2019 doi.org/10.1097/MPG.0000000000002360

A. Abbruzzo , I. Vujačić, A.M. Mineo, E.C. Wit

Selecting the tuning parameter in penalized Gaussian graphical models

Statistics and Computing, 559-569, 2019 doi.org/10.1007/s11222-018-9823-5

P. Behrouzi, E.C. Wit

De novo construction of polyploid linkage maps using discrete graphical models

Bioinformatics, 1-3, 2019 doi.org/10.1093/bioinformatics/bty777

N. Demetrashvili, N. Smidt, H. Snieder, E.R. Van Den Heuvel, E.C. Wit

Variance components models for analysis of big family data of health outcomes in the lifelines cohort study

Twin Research and Human Genetics, 1083-1093, 2019 https://doi.org/10.1017/thg.2019.1

E.C. Wit

Introduction to network inference in genomics

Network Science: An Aerial View, 99-119, 2019 doi.org/10.1007/978-3-030-26814-5_7

R. Mohammadi, E.C. Wit

BDgraph: An R package for Bayesian structure learning in graphical models

Journal of Statistical Software, 1-2, 2019 doi.org/10.18637/jss.v089.i03

S. E. Balafas, W. P. Krijnen, W. J. Post, E. C. Wit

An R Package for Nonparametric IRT Modelling of Unfolding Processes

The R Journal, journal.r-project.org

N. P. Gill, L. D’Arrigo, E. C Wit

Comparison of Postoperative Fever and Effectiveness of Percutaneous Nephrolithotomy (PCNL) Versus Retrograde Intrarenal Surgery (RIRS) for the Treatment of Renal Stones

SN Comprehensive Clinical Medicine, 1(3), 154-159.019, 2019 doi.org/10.1007/s42399-018-0023-6

P. Behrouzi, E. C. Wit

Detecting epistatic selection with partially observed genotype data by using copula graphical models

Journal of the Royal Statistical Society. Series C: Applied Statistics, 68(1), 141-160, 2019 doi.org/10.1111/rssc.12287